This library implements a simplified version of the SAScan algorithm for constructing suffix arrays for large text files. The SAScan algorithm is an external memory algorithm that can handle files ...

This repository contains a Java implementation of constructing a suffix array and LCP (Longest Common Prefix) array using Kasai's algorithm. The code reads input from a file, computes the arrays, and ...

Abstract: In bioinformatics applications, suffix arrays are widely used to DNA sequence alignments in the initial exact match phase of heuristic algorithms. With the exponential growth and ...

is very effective for understanding the algorithm, and the same goes for understanding the visualization of the program. So, as the understanding of algorithms and programming progresses, the “ ...