Let $s$ be a string of length $n$. The $i$-th suffix of $s$ is the substring $s[i \ldots n - 1]$. A suffix array will contain integers that represent the starting ...

The Knuth-Morris-Pratt (KMP) algorithm is an efficient string matching technique that avoids redundant comparisons by preprocessing the pattern using the LPS (Longest Prefix which is also Suffix) ...

Abstract: Suffix arrays and trees are important and fundamental string data structures which lie at the foundation of many string algorithms, with important applications in computational biology, text ...

Abstract: In bioinformatics applications, suffix arrays are widely used to DNA sequence alignments in the initial exact match phase of heuristic algorithms. With the exponential growth and ...