This repository contains files and scripts for running molecular dynamics simulations of cyclohexane using NAMD. The project involves setting up the simulation environment, running simulations at ...
† Department of Molecular Biosciences and Center for Computational Biology, The University of Kansas, Lawrence, Kansas 66047, United States ‡ Department of Chemistry and Chemical Biology, Rutgers ...
This repository contains a Google Colab notebook designed for running high-performance Molecular Dynamics (MD) simulations using NAMD 3 with CUDA acceleration. Uses CUDA for GPU acceleration.
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